Abbaspour, M., Javid, A. H., Mashinchian, A., Habibi, A. 2014. Determination of physical and chemical properties of water of khersan river and investigation on Its yearly changes. Journal of Environmental Science and Technology, 15(4): 1-11. (In Persian). https://doi.org/10.22034/jest.2017.11065
Abedini, A., & Salavatian, S.M. 2016. Hydro-chemical and phytoplankton characteristics of Arasbaran reservoir dam. Journal of New Technologies in Aquaculture Development, 10(3): 49-58. (In Persian). https://doi.org/20.1001.1.20080026.1395.10.3.5.4
Abgoun, A., Ebrahimi, K., & Heidari, M. 2024. Investigating the Damaging Events of Talar River, Iran, in Tandem with Presenting a Proposed Framework. Iranian Journal of Watershed Management Science and Engineering, 18(66): 73-87. (In Persian). https://doi.org/10.22034/18.66.73
Ács, É., Szabó, K., Tóth, B., & Kiss, K.T. 2004. Investigation of benthic algal communities, especially diatoms of some Hungarian streams in connection with reference conditions of the Water Framework Directives. Acta Botanica Hungarica, 46(3-4): 255-278. https://doi.org/10.1556/abot.46.2004.3-4.1
Adl, M. M., Iranbakhsh, A., Noroozi, M., Asri, Y., & Saadatmand, S. 2020. Epipelic diatoms flora of Kordan River, Alborz province in Iran. Modern Phytomorphology, 14: 40-48.
Agarwal, N. 2025. Diatoms: Basic and Applied Research. Educohack Press.
AgAtabay, A., Panahy Mirzahasanlou, J., Rostami Charati, F., & Akbari, R. 2021. Biodiversity of diatoms in khormarud river, Golestan Province. Journal of Natural Environment, 73(4): 625-636. (In Persian). https://doi.org/10.22059/jne.2021.304839.2018
Ahmadi Musaabad, L., Panahy Mirzahasanlou, J., G Mahmoodlu, M., & Bahlakeh, A. 2019. Diatom flora in three springs of Golestan Province. Plant, Algae, and Environment, 3(2): 432-442. https://doi.org/ 10.29252/JPR.3.2.432
Allan, J.D. 2004. Landscapes and riverscapes: the influence of land use on stream ecosystems. Annual Review of Ecology, Evolution, and Systematics, 35(1): 257-284. https://doi.org/10.1146/annurev.ecolsys.35.120202.110122
Allende, L., Tell, G., Zagarese, H., Torremorell, A., Pérez, G., Bustingorry, J., & Izaguirre, I. 2009. Phytoplankton and primary production in clear-vegetated, inorganic-turbid, and algal-turbid shallow lakes from the pampa plain (Argentina). Hydrobiologia, 624: 45-60. https://doi.org/10.1007/s10750-008-9665-9
APHA. 1999. Standard methods for examination of water and wastewater. American public health association, American water works Association, Water environment federation. Waldorf, Maryland.
Archibald, C.G.M., & Taylor, J. C. 2007. The assessment of diffuse pollution from acid-mine drainage using an updated and revised diatom assessment procedure as an added-value bio-monitoring tool. Water Science and Technology, 55(3): 151-160. https://doi.org/10.2166/wst.2007.083
Babolhakami, A., & Gholami Sefidkouhi, M. A. 2019. Analyze of Talar River water quality using multivariate techniques. Journal of Watershed Management Research, 9(18): 250-259. (In Persian). https://doi.org/ ‎ 10.29252/jwmr.9.18.250
Bao, L., Chen, J., Tong, H., Qian, J., & Li, X. 2022. Phytoplankton dynamics and implications for eutrophication management in an urban river with a series of rubber dams. Journal of Environmental Management, 311: 114865. https://doi.org/10.1016/j.jenvman.2022.114865
Barinova, S., & Mamanazarova, K. 2021. Diatom algae-indicators of water quality in the lower Zarafshan river, Uzbekistan. Water, 13(3): 358-376. https://doi.org/10.3390/w13030358
Bellinger, E. D. 1992. A key to common algae. The Institution of water and Environmental Management, London.
Bellinger, E.G., & Sigee, D.C. 2010. Freshwater Algae, Identification and Use as Bioindicators. Wiley-Blackwell.
Bérard, A., Rimet, F., Capowiez, Y., & Leboulanger, C. 2004. Procedures for determining the pesticide sensitivity of indigenous soil algae: a possible bioindicator of soil contamination. Archives of Environmental contamination and Toxicology, 46: 24-31. https://doi.org/10.1007/s00244-003-2147-1
Berthon, V., Bouchez, A., & Rimet, F. 2011. Using diatom life-forms and ecological guilds to assess organic pollution and trophic level in rivers: a case study of rivers in south-eastern France. Hydrobiologia, 673(1): 259-271. https://doi.org/10.1007/s10750-011-0786-1
Chen, X., Mao, X., Cao, Y., & Yang, X. 2013. Use of siliceous algae as biological monitors of heavy metal pollution in three lakes in a mining city, southeast China. Oceanological and Hydrobiological Studies, 42(3): 233-242. https://doi.org/10.2478/s13545-013-0079-6
Choirun, A., Sari, J., Hikmah, S., & Iranawati, F. 2015. Identifikasi Fitoplankton Spesies Harmfull Algae Bloom (HAB) Saat Kondisi Pasang di Perairan Pesisir Brondong, Lamongan, Jawa Timur. Jurnal Administrasi dan Kebijakan Kesehatan Indonesia, 25(2): 106193.
Cox, E. J. 1996. Identification of freshwater diatoms from live material. Chapman & Hall. London, UK.
Dengg, M., Stirling, C. H., Reid, M. R., Verburg, P., Armstrong, E., Kelly, L. T., & Wood, S. A. 2022. Growth at the limits: comparing trace metal limitation of a freshwater cyanobacterium (Dolichospermum lemmermannii) and a freshwater diatom (Fragilaria crotonensis). Scientific reports, 12(1): 467. https://doi.org/10.1038/s41598-021-04533-9
Dorigo, U., Bourrain, X., Berard, A., & Leboulanger, C. 2004. Seasonal changes in the sensitivity of river microalgae to atrazine and isoproturon along a contamination gradient. Science of the Total Environment, 318(1-3): 101-114. https://doi.org/10.1016/S0048-9697(03)00398-X
Feeley, H.B., Bradley, C., Free, G., Kennedy, B., Little, R., McDonnell, N., Plant, C., Trodd, W., Wynne, C., & Boyle, S.O. 2020. A national macroinvertebrate dataset collected for the biomonitoring of Ireland’s river network 2007-2018. Scientifc Data, 7(280): 1–9. https://doi.org/10.1038/s41597-020-00618-8
Ganai, A. H., & Parveen, S. 2014. Effect of physico-chemical conditions on the structure and composition of the phytoplankton community in Wular Lake at Lankrishipora, Kashmir. International Journal of Biodiversity and Conservation, 6(1): 71-84. https://doi.org/10.5897/IJBC2013.0597
Ghomi, A., Nabavi, S. M. B., & Rajabzadeh, G. E. 2021. Use of large ecological indices of macro-invertebrate to assess water quality in Kordan River. Wetland Ecobiology, 13 (3): 87-102. (In Persian).
Guasch, H., Ivorra, N., Lehmann, V., Paulsson, M., Real, M., & Sabater, S. 1998. Community composition and sensitivity of periphyton to atrazine in flowing waters: the role of environmental factors. Journal of Applied Phycology, 10: 203-213. https://doi.org/10.1023/A:1008035212208
Guiry., M. D. 2012. How many species of algae are there. Journal of Phycology, 48(5): 1057-1063. https://doi.org/10.1111/j.1529-8817.2012.01222.x
Jamalou, F., Falahian, F.A., Nezhadsatari, T., & Majd, A. 2005. Study of diatoms flora of Jajrood River. Journal of Environmental Science and Technology, 26: 96-112. (In Persian).
Juneja, A., Ceballos, R.M., & Murthy, G.S. 2013. Effects of Environmental Factors and Nutrient Availability on the Biochemical Composition of Algae for Biofuels Production: A Review. Energies, 6(9): 4607-4638. https://doi.org/10.3390/en6094607
Kheiri, S., Nejadsattari, T., Hamdi, S., & Asri, Y. 2012. Periphytic diatom flora of River Karaj and 25 new records from Iran. Journal of Biology, 7(1): 1-22. https://doi.org/10.1080/0269249X.2018
Kheiri, S., Solak, C. N., Edlund, M. B., Spaulding, S., Nejadsattari, T., Asri, Y., & Hamdi, S. M. M. 2018. Biodiversity of diatoms in the Karaj River in the Central Alborz, Iran. Diatom Research, 33(3): 355-380. https://doi.org/10.1080/0269249X.2018.1557747
Kheiri, S., Tavakoli, M., & Oraghi Ardebili, Z. 2018. Diatom flora of Marbareh River, Dez catchment, Lorestan, Iran. Journal of Plant Research, 31(3): 579-586. (In Persian). https://doi.org/20.1001.1.23832592.1397.31.3.8.8
Kitaka, N., Omondi, L. A., Mureithi, P. W., Bauer, A., Melcher, A., & Ssanyu, G. A. 2024. A critical review of biomonitoring in East African rivers: fostering community-based collaboration for environmental change observation. Frontiers in Water, 6: 1360941. https://doi.org/10.3389/frwa.2024.1360941
Kobayasi, H. 1982. Most pollution-tolerant diatoms of severely polluted rivers in the vicinity of Tokyo. Japanese Society of Phycology, 30: 188-196.
Krebs, C. J. 1999. Ecological Methodology. University of British Columbia, Jim Green publisher.
Lange-Bertalot, H. 1993. 85 New Taxa. Cramer, Berlin.
Law, R. J., Elliott, J. A., & Thackeray, S. J. 2014. Do functional or morphological classifications explain stream phytobenthic community assemblages. Diatom Research, 29(4): 309-324. https://doi.org/10.1080/0269249X.2014.889037
Liu, L., He, X. Y., Fu, J. K., Yang, Y. J., Mi, W. M., Shi, J. Q., & Wu, Z. X. 2019. Benthic diatom communities in the main stream of three gorges reservoir area and Its relationship with environmental factors. Huan Jing Ke Xue Huanjing Kexue, 40(8): 3577-3587. https://doi.org/10.13227/j.hjkx.201901017
Luís, A. T., Teixeira, P., Almeida, S. F. P., Matos, J. X., & Da Silva, E. F. 2011. Environmental impact of mining activities in the Lousal area (Portugal): chemical and diatom characterization of metal-contaminated stream sediments and surface water of Corona stream. Science of the Total Environment, 409(20): 4312-4325. https://doi.org/10.1016/j.scitotenv.2011.06.052
Majewska, R., D’Alelio, D., & De Stefano, M. 2014. Cocconeis ehrenberg (Bacillariophyta), a genus dominating diatom communities associated with Posidonia oceanica Delile (monocotyledons) in the Mediterranean Sea. Aquatic Botany, 112: 48-56. https://doi.org/10.1016/j.aquabot.2013.07.008
Maosen, H. 1983. Fresh water plankton illustration. Agriculture Publishing House.
Markert, B. A., Breure, A. M., & Zechmeister, H. G. 2003. Bioindicators and Biomonitors. Elsevier.
Martín, G., & De Los Reyes Fernández, M. 2012. Diatoms as indicators of water quality and ecological status: Sampling, analysis and some ecological remarks. Ecology. Water Quality, 9: 183-204.
Masoudian, N., Fallahian, F., Nejadsattari, T., Mattaji, A., & Khavarinejad, R. 2009. Epilithic diatoms as indicators of water quality in the tajan river, Mazandaran province, Iran. Biological Sciences (Danish-Zisti-Iran), 4(2): 57-66. (In Persian).
Mohammadi, H., Paighambari, S. Y., Abdolmaleki, S., Fallahi, M., Ghorbani, R., & Hosaini, S. A. 2016. Phytoplankton community structure and biodiversity assessment of Golbolagh Reservoir, Kurdistan Province. Journal of Aquatic Ecology, 6(3): 45-54. (In Persian). https://doi.org/20.1001.1.23222751.1395.6.3.5.7
Mohebbi, F., Mohsenpour Azari, A., & Asem, A. 2012. Phytoplankton population and its indices in Aras dam reservoir. Iranian Journal of Biology, 25(2): 316-328. (In Persian).
Morais, K. S. D., Bartozek, E. R., Zorzal-Almeida, S., Bicudo, D. C., & Bicudo, C. E. D. M. 2018. Taxonomy and ecology of order Surirellales (Bacillariophyceae) in tropical reservoirs in Southeastern of Brazil. Acta Limnologica Brasiliensia, 30: e204. https://doi.org/10.1590/S2179-975X9817
Morin, S., Bonet, B., Corcoll, N., Guasch, H., Bottin, M., & Coste, M. 2015. Cumulative stressors trigger increased vulnerability of diatom communities to additional disturbances. Microbial Ecology, 70: 585-595. https://doi.org/10.1007/s00248-015-0602-y
Nakanishi, Y., Sumita, M., Yumita, K., Yamada, T., & Honjo, T. 2004. Heavy-metal pollution and its state in algae in Kakehashi river and Godani river at the foot of Ogoya mine, Ishikawa Prefecture. Analytical Sciences, 20(1): 73-78. https://doi.org/10.2116/analsci.20.73
Noedoost, F., & Shoukat, P. 2019. Survey Of Abundance and Diversity of Phytoplankton in Maroon Dam Lake of Khuzestan Province. Journal Of Marine Biology, 10(40): 25-46. (In Persian).
O'Farrell, I. 1993. Phytoplankton ecology and limnology of the Salado River (Buenos Aires, Argentina). Hydrobiologia, 271: 169-178. https://doi.org/10.1007/BF00005415
Palmer G.A. 1969. Composite rating of algae tolerating organic pollution. Journal of Phycology, 5: 78-82. https://doi.org/10.1111/j.1529-8817. 1969.tb02581. x
Panahy Mirzahasnlou, J., Ramezanpour, Z., Nejadsattari, T., Imanpour-Namin, J., & Asri, Y. 2020. Temporal and spatial distribution of diatom assemblages and their relationship with environmental factors in Balikhli River. Ecohydrology and Hydrobiology, 20(1): 102-111. https://doi.org/10.1016/j.ecohyd.2019.04.002
Panahy, M. A., Fataei, E., & Panahy, M. J. 2020. Investigation of diatoms in Anbaran Chay River of Ardabil province in relation to water quality as bio indicators. Journal of Wetland Ecobiology, 12(44): 37-48. (In Persian).
Pančić, M., Torres, R. R., Almeda, R., & Kiørboe, T. 2019. Silicified cell walls as a defensive trait in diatoms. Proceedings of the Royal Society B, 286(1901): 20190184. https://doi.org/10.1098/rspb.2019.0184
Parikh, H. S., Dave, G., Singh, P. K., & Tiwari, A. 2025. Exploring the significance of xenic and axenic cultures for diatoms: methodological insights, scope, and biotechnological implications. Systems Microbiology and Biomanufacturing, 5: 969-989. https://doi.org/10.1007/s43393-025-00363-2
Patrick, R., & Reimer, C. W. 1966. The diatoms of the United States (second printing). Printing in United States of America.
Patrick, R., & Reimer, C.W. 1966. The diatoms of the United States, exclusive of Alaska and Hawaii. Monographs of the Academy of Natural Sciences of Philadelphia, 13(1): 1–688.
Patrick, R., & Reimer, C.W. 1975. The diatoms of the United States, exclusive of Alaska and Hawaii. Monographs of the Academy of Natural Sciences of Philadelphia, 13: (2/1): 1–213.
Potapova, M., & Hamilton, P. B. 2007. Morphological and ecological variation within the Achnanthidium minutissimum (Bacillariophyceae) species complex. Journal of phycology, 43(3): 561-575. https://doi.org/10.1111/j.1529-8817.2007.00332. x
Pourheydar Khoshkrudi, B., Jafari, N., & Naqinezhad, A. 2014. An ecological and floristic study of the diatoms in Babolrud River. Journal of Plant Biological Sciences, 6(19): 43-56. (In Persian). https://doi.org/20.1001.1.20088264.1393.6.19.5.6
Prahardika, B. A., & Styawan, W. M. L. D. 2020. Epilithic diatom diversity study and its potential as bioindicator of river waters quality in Coban Tarzan Malang regency. Journal of Tropical Biology, 8(2): 116-124. https://doi.org/10.21776/ub.biotropika.2020.008.02.07
Prescott, G. W. 1962. Algae of western great lakes area. W.M.C. Brown Company Publishing, Iowa, USA.
Qu, J., & Peng, J. 2025. Significance and Enlightenment of Implementing Water Ecological Assessment. Water & Ecology, 1(1): 100002. https://doi.org/10.1016/j.wateco.2025.100002
Qu, Y., Wu, N., Makareviciute, K., Guse, B., & Fohrer, N. 2018. Effects of land-use pattern and physiochemical conditions on phytoplankton communities in a German lowland catchment. Fundamental and Applied Limnology: Archiv für Hydrobiologie, 191(3): 175-187. https://doi.org/10.1127/fal/2018/1125
Rakowska, B. 2004. Benthic diatoms in polluted river sections of Central Poland. Oceanological and Hydrobiological Studies, 33: 11-21.
Sabater, S. 2000. Diatom communities as indicators of environmental stress in the Guadiamar River, SW. Spain, following a major mine tailings spill. Journal of Applied Phycology, 12: 113-124. https://doi.org/10.1023/A:1008197411815
Sadeghi Talarposhti, R., Ebrahimi, K., & Hoorfar, A. 2020. Determination of Decay Rate of Pollution in the Talar and Babolrood Rivers. Irrigation and Water Engineering, 10(4): 82-95. (In Persian). https://doi.org/10.22125/iwe.2020.110070
Salmaso, F., Quadroni, S., Compare, S., Gentili, G., & Crosa, G. 2019. Benthic diatoms as bioindicators of environmental alterations in different watercourses of northern Italy. Environmental Monitoring and Assessment, 191(3): 158-175. https://doi.org/10.1007/s10661-019-7290-x
Salomoni, S. E., Rocha, O., Callegaro, V. L., & Lobo, E. A. 2006. Epilithic diatoms as indicators of water quality in the Gravataí river, Rio Grande do Sul, Brazil. Hydrobiologia, 559: 233-246. https://doi.org/10.1007/s10750-005-9012-3
Sharifinia, M., Mahmoudifard, A., Gholami, K., Namin, J. I., & Ramezanpour, Z. 2016. Benthic diatom and macroinvertebrate assemblages, a key for evaluation of river health and pollution in the Shahrood River, Iran. Limnology, 17: 95-109. https://doi.org/10.1007/s10201-015-0464-5
Sharma, D. K., & Singh, R. P. 2013. Correlation between physico-chemical parameters and phytoplanktons of Tighra reservoir, Gwalior, Madhya Pradesh. International Journal of Security and Networks, 4(1): 90-95.
Shibabaw, T., Beyene, A., Awoke, A., Tirfie, M., Azage, M., & Triest, L. 2021. Diatom community structure in relation to environmental factors in human influenced rivers and streams in tropical Africa. Plos one, 16(2): e0246043. https://doi.org/10.1371/journal.pone.0246043
Smith, W. 1950. The fresh water Algae of the United States. London.
Soegianto, A. 2010. Ekologi Perairan Tawar. Surabaya. Pusat Penerbitan dan Percetakan (AUP).
Štefková, E. 2006. Epilithic diatoms of mountain lakes of the Tatra Mountains (Slovakia). Biologia, 61: 101-108. https://doi.org/10.2478/s11756-006-0123-8
Stenger-Kovacs, C., Lengyel, E., Sebestyen, V., & Szabo, B. 2020. Effects of land use on streams: traditional and functional analyses of benthic diatoms. Hydrobiologia, 847(13): 2933-2946. https://doi.org/10.1007/s10750-020-04294-y
Szabó, K. A. T. A. L. I. N., Kiss, K. T., Taba, G., & Ács, É. 2005. Epiphytic diatoms of the Tisza River, Kisköre Reservoir and some oxbows of the Tisza River after the cyanide and heavy metal pollution in 2000. Acta Botanica Croatica, 64(1): 1-46.
Taylor, J. C., Harding, W. R., & Archibald, C. G. M. 2007. A methods manual for the collection, preparation and analysis of diatom samples. Version, 1: 1-60.
Taylor, J. C., Harding, W. R., Archibald, C. G. M., & Van Rensburg, L. 2005. Diatoms as indicators of water quality in the Jukskei-Crocodile River system in 156 and 1957, a re-analysis of diatom count data generated by BJ Cholnoky. Water SA, 31(2): 237-246. https://doi.org/10.4314/wsa.v31i2.5176
Tiffany., L. H., & Britton, M. E. 1971. The algae of Illinois. Hanfer Publishing Company, New York, USA.
Toruan, R. L., Coggins, L. X., & Ghadouani, A. 2021. Response of zooplankton size structure to multiple stressors in urban lakes. Water, 13(16): 2305-2315. https://doi.org/10.3390/w13162305
Venkateswarlu, N., & Reddy, P. M. 2000. Plant biodiversity and bioindicators in aquatic. International Journal of Pharmaceutical and Biological Archive, 3: 1304-1312.
Wang, H., & He, G. 2022. Rivers: Linking nature, life, and civilization. River, 1(1): 25-36. https://doi.org/10.1002/rvr2.7
Wetzel, R. G., & Likens, G. E. 1991. Limnological analyses. 2nd edn. Springer, New York.
Zhao, Z., Mi, T., Xia, L., Yan, W., Jiang, Y., & Gao, Y. 2013. Understanding the patterns and mechanisms of urban water ecosystem degradation: phytoplankton community structure and water quality in the Qinhuai River, Nanjing City, China. Environmental Science and Pollution Research, 20: 5003-5012. https://doi.org/10.1007/s11356-013-1464-9